Dr Lan Wei

School of Computer Science, University College Dublin, Ireland

Research: DeepEpiEEG: A Deep Learning-Based Biomarker for the Diagnosis and Classification of Epilepsy from Paediatric EEG

  • Postdoctoral Research Fellow – Marie-Skłodowska Curie
    Fellowships (NeuroInsight), University College Dublin, Ireland (2022-2024)

 

 

Education:

  • PhD Computer Science– University College Dublin (2018-2022)
  • MSc Computer Science – University College Dublin (2016-2018)
  • BSc Physics– Yanbian University (2011-2015)

Papers:

  1. Lan Wei, Halima Boutouil, Rogerio R Gerbatin, Omar Mamad, Mona Heiland, Cristina R Reschke, Federico Del Gallo, Paolo F Fabene, David C Henshall, Madeleine Lowery, Gareth Morris and Catherine Mooney. (2021). Detection of spontaneous seizures in EEGs in multiple experimental mouse models of epilepsy. Journal of Neural Engineering.  DOI:  10.1088/1741-2552/ac2ca0
  2. Lan Wei, Soraia Ventura, Sean Mathieson, Geraldine Boylan, Madeleine Lowery, Catherine Mooney. (2021). Spindle-AI: Sleep spindle number and duration estimation in infant EEG. IEEE transactions on bio-medical engineering. DOI: 10.1109/TBME.2021.3097815
  3. Antoniadi, A.M.; Du, Y.; Guendouz, Y.; Wei, L.; Mazo, C.; Becker, B.A.; Mooney, C. (2021). Current Challenges and Future Opportunities for XAI in Machine Learning-Based Clinical Decision Support Systems: a Systematic Review. Applied Sciences, 11(11), 5088. DOI: 10.3390/app11115088
  4. L. Wei and C. Mooney. (2020). Epileptic Seizure Detection in Clinical EEGs Using an XGboost-based Method. 2020 IEEE Signal Processing in Medicine and Biology Symposium (SPMB). DOI: 10.1109/SPMB50085.2020.9353625
  5. Lan Wei, Soraia Ventura, Madeleine Lowery, Mary Anne Ryan, Sean Mathieson, Geraldine B. Boylan and Catherine Mooney. (2020). Random Forest-based Algorithm for Sleep Spindle Detection in Infant EEG. 2020 42nd Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC). DOI: 10.1109/EMBC44109.2020.9176339
  6. Yuhan Du, Anthony R Rafferty, Fionnuala M McAuliffe, Lan Wei and Catherine Mooney. (2022). An Explainable Machine Learning-based Clinical Decision Support System for the Prediction of Gestational Diabetes Mellitus. Scientific Reports (12), 1170. DOI: 10.1038/s41598-022-05112-2

Poster:

  1. L. Wei, R. Gerbatin, O. Mamad, H. Boutouil, C. Reschke, M. Lowery, D. Henshall, G. Morris and C. Mooney. (2020). XGboost-based Method for Seizure Detection in Mouse Models of Epilepsy. 2020 IEEE Signal Processing in Medicine and Biology Symposium (SPMB). DOI: 10.1109/SPMB50085.2020.9353632
  2. Lan Wei, Rogerio Gerbatin, Cristina R. Reschke, Gareth Morris, David C. Henshall, and Catherine Mooney. (2019). Automated Annotation of EEG in a Mouse Model of Epilepsy. ACM Celebration of Women in Computing: womENcourage, Rome, Italy, 2019.

Volunteer: CS Sparks – I am a volunteer tutor of the girls in DEIS schools of Dublin, help them to have fun in coding and help them to form the basic logic thought on computer programming by some interesting courses. Like micro-bits, robotic…

Teaching Assistant:

  • Beijing-Dublin International College (BDIC)
  1. Software Engineering Project
  2. Data mining & Machine Learning
  3. Introduction to Software Engineering
  4. Software Engineering Degree Project
  • Genomics Data Science-Centre for Research Training

Galway, Ireland Teaching Assistant (Data mining & Machine Learning) in Genomics Data Science-Centre for Research Training in Galway University.